RNAJunction Database - Junction Profile:11482
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11482: 2HHH_j4_A-G109_A-U235_A-G282_A-C307

Primary Citation: (from PDB entry 2HHH)

F.SCHLUENZEN THE ANTIBIOTIC KASUGAMYCIN MIMICS MRNA NUCLEOTIDES TO DESTABILIZE TRNA BINDING AND INHIBIT CANONICAL TRANSLATION INITIATION. NAT.STRUCT.MOL.BIOL. V. 13 871 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:2J02 j4 A-G115 A-U239 A-G286 A-C311 
NC-IUBMB Classification:Cluster Page
Angles: 62:63:108:118:125:171°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.70063Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGUCCC 6nt

Strand 2: Chain A: GUGAGUAACGCG 12nt

Strand 3: Chain A: GGGUAGCC 8nt

Strand 4: Chain A: GGCCAC 6nt

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