RNAJunction Database - Junction Profile:3756
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3756: 1NJM_j4_0-C2264_0-C2321_0-G2349_0-C2360

Primary Citation: (from PDB entry 1NJM)

A.BASHAN I.AGMON R.ZARIVATCH F.SCHLUENZEN J.M.HARMS R.BERISIO H.BARTELS H.A.HANSEN A.YONATH STRUCTURAL BASIS OF THE RIBOSOMAL MACHINERY FOR PEPTIDE BOND FORMATION, TRANSLOCATION, AND NASCENT CHAIN PROGRESSION MOL. CELL V. 11 91 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:4-wayCluster:1NJP j4 0-C2264 0-C2321 0-G2349 0-C2360 
NC-IUBMB Classification:Cluster Page
Angles: 30:44:74:80:109:150°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.08849Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GCUUGACU 8nt

Strand 2: Chain 0: CCAAAGGU 8nt

Strand 3: Chain 0: AGGGA 5nt

Strand 4: Chain 0: UCGGG 5nt

Valid XHTML 1.0 Transitional