RNAJunction Database - Junction Profile:5214
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5214: 1QA6_j3_C-G106_C-C126_C-U151

Primary Citation: (from PDB entry 1QA6)

G.L.CONN D.E.DRAPER E.E.LATTMAN A.G.GITTIS CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX SCIENCE V. 284 1171 1999

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:3-wayCluster:1C04 j3 E-G6 E-C26 E-U51 
NC-IUBMB Classification:Cluster Page
Angles: 46:149:152°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.71479Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain C: GCCAUCAUUUAAAGAAAGC 19nt

Strand 2: Chain C: AGGAUGUAGGC 11nt

Strand 3: Chain C: GCUCACU 7nt

Valid XHTML 1.0 Transitional