RNAJunction

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5674: 1S1I_j7_3-A912_3-G928_3-U1041_3-C1069_3-A1086_3-C1267_3-A1286

Primary Citation: (from PDB entry 1S1I)

C.M.SPAHN M.G.GOMEZ-LORENZO R.A.GRASSUCCI R.JORGENSEN G.R.ANDERSEN R.BECKMANN P.A.PENCZEK J.P.G.BALLESTA J.FRANK DOMAIN MOVEMENTS OF ELONGATION FACTOR EEF2 AND THE EUKARYOTIC 80S RIBOSOME FACILITATE TRNA TRANSLOCATION. EMBO J. V. 23 1008 2004

Experimental Method: ELECTRON_MICROSCOPY

Structure Images

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Derived Information

Type:	7-way	Cluster:	1KC8 j7 A-A912 A-G928 A-U1041 A-C1069 A-A1086 A-C1267 A-A1286
NC-IUBMB Classification:			Cluster Page
Angles:	32:38:41:41:61:64:64:76:92:102:102:103:118:125:131:133:135:141:142:156:166°
Fit Criteria:	A
Extracted Structure:	Download
Minimized Structure:	Download RMSD = 0.83506Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 3: AUGACC 6nt

Strand 2: Chain 3: CGAAACAU 8nt

Strand 3: Chain 3: GAUUCCGGU 9nt

Strand 4: Chain 3: ACCAGGAGG 9nt

Strand 5: Chain 3: CCAGAGAU 8nt

Strand 6: Chain 3: GUCCGUAC 8nt

Strand 7: Chain 3: GUAAUCGAGUAG 12nt