RNAJunction Database - Junction Profile:7881
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 7881: 1VS6_j3_B-G1056_B-C1076_B-U1101

Primary Citation: (from PDB entry 1VS6)

B.S.SCHUWIRTH A.VILA-SANJURJO J.H.D.CATE STRUCTURAL ANALYSIS OF KASUGAMYCIN INHIBITION OF TRANSLATION. NAT.STRUCT.MOL.BIOL. V. 13 879 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:3-wayCluster:2AW4 j3 B-G1056 B-C1076 B-U1101 
NC-IUBMB Classification:Cluster Page
Angles: 43:150:157°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.802Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: GCCAUCAUUUAAAGAAAGC 19nt

Strand 2: Chain B: AGGAUGUUGGC 11nt

Strand 3: Chain B: GCUCACU 7nt

Valid XHTML 1.0 Transitional