#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS3HS6
FINGERPRINT = 72
LOOP_LENGTH_SUM = 9
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  272
S1_NAME_ID3 = 283
S1_NUM_ID5_ORIG =  272
S1_NUM_ID3_ORIG = 283
S1_NAME2_ID5 =  274
S1_NAME2_ID3 = 281
S1_NUM2_ID5_ORIG =  274
S1_NUM2_ID3_ORIG = 281
S1_SQ2 = CCUGAAUC
S1_SQLEN2 = 8
S1_SQ = AGCCUGAAUCAG
S1_SQLEN = 12
S1_CHAR = B
## Properties of strand 2
S2_NAME_ID5 =  357
S2_NAME_ID3 = 365
S2_NUM_ID5_ORIG =  357
S2_NUM_ID3_ORIG = 365
S2_NAME2_ID5 =  359
S2_NAME2_ID3 = 363
S2_NUM2_ID5_ORIG =  359
S2_NUM2_ID3_ORIG = 363
S2_SQ2 = GUGAG
S2_SQLEN2 = 5
S2_SQ = CUGUGAGCU
S2_SQLEN = 9
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 9
H1_INID2 = 3
H1_OUTID2 = 7
H1_INID2_ORIG = 274
H1_OUTID2_ORIG = 363
H1_INSEQ_CHAR = B
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 65.53875140776012
H1_P_Y = 25.306011085935275
H1_P_Z = -67.12605591448926
# Orientation:
H1_DX_X = 0.7508930811264065
H1_DX_Y = 0.10334554577950072
H1_DX_Z = -0.6522877270683693
H1_DY_X = -0.6528411130565104
H1_DY_Y = 0.2653920165047161
H1_DY_Z = -0.7094825992783029
H1_DZ_X = 0.0997900887844736
H1_DZ_Y = 0.958585820750077
H1_DZ_Z = 0.2667492501156943
## Properties of helix 2
H2_INID = 1
H2_OUTID = 12
H2_INID2 = 3
H2_OUTID2 = 10
H2_INID2_ORIG = 359
H2_OUTID2_ORIG = 281
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = B
# Position:
H2_P_X = 83.42543321517094
H2_P_Y = 10.476079261696903
H2_P_Z = -48.95417925866245
# Orientation:
H2_DX_X = -0.046316772904475556
H2_DX_Y = 0.9966307146067663
H2_DX_Z = -0.0676902891862099
H2_DY_X = -0.5550145659662178
H2_DY_Y = 0.030666096434204704
H2_DY_Z = 0.8312751783223291
H2_DZ_X = 0.8305501719420931
H2_DZ_Y = 0.076071080128294
H2_DZ_Z = 0.5517242088716614
#############  END of Description of junction: j1