############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 3 LILLEY = HS1HS13HS5 FINGERPRINT = 46:152:152 LOOP_LENGTH_SUM = 19 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 324 S1_NAME_ID3 = 342 S1_NUM_ID5_ORIG = 324 S1_NUM_ID3_ORIG = 342 S1_NAME2_ID5 = 326 S1_NAME2_ID3 = 340 S1_NUM2_ID5_ORIG = 326 S1_NUM2_ID3_ORIG = 340 S1_SQ2 = CAUCAUUUAAAGAAA S1_SQLEN2 = 15 S1_SQ = GCCAUCAUUUAAAGAAAGC S1_SQLEN = 19 S1_CHAR = D ## Properties of strand 2 S2_NAME_ID5 = 304 S2_NAME_ID3 = 314 S2_NUM_ID5_ORIG = 304 S2_NUM_ID3_ORIG = 314 S2_NAME2_ID5 = 306 S2_NAME2_ID3 = 312 S2_NUM2_ID5_ORIG = 306 S2_NUM2_ID3_ORIG = 312 S2_SQ2 = GAUGUAG S2_SQLEN2 = 7 S2_SQ = AGGAUGUAGGC S2_SQLEN = 11 S2_CHAR = D ## Properties of strand 3 S3_NAME_ID5 = 349 S3_NAME_ID3 = 355 S3_NUM_ID5_ORIG = 349 S3_NUM_ID3_ORIG = 355 S3_NAME2_ID5 = 351 S3_NAME2_ID3 = 353 S3_NUM2_ID5_ORIG = 351 S3_NUM2_ID3_ORIG = 353 S3_SQ2 = UCA S3_SQLEN2 = 3 S3_SQ = GCUCACU S3_SQLEN = 7 S3_CHAR = D ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 326 H1_OUTID2_ORIG = 312 H1_INSEQ_CHAR = D H1_OUTSEQ_CHAR = D # Position: H1_P_X = 59.27664024192725 H1_P_Y = 124.6702084318253 H1_P_Z = 22.288460331055724 # Orientation: H1_DX_X = -0.014661328747969549 H1_DX_Y = -0.06856051369257443 H1_DX_Z = -0.9975392229890225 H1_DY_X = -0.6079266488542601 H1_DY_Y = -0.7914633587849806 H1_DY_Z = 0.06333199281262125 H1_DZ_X = -0.7938578179070674 H1_DZ_Y = 0.6073592080992967 H1_DZ_Z = -0.030075858837744107 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 19 H2_INID2 = 3 H2_OUTID2 = 17 H2_INID2_ORIG = 351 H2_OUTID2_ORIG = 340 H2_INSEQ_CHAR = D H2_OUTSEQ_CHAR = D # Position: H2_P_X = 63.044137180242096 H2_P_Y = 123.94623628612935 H2_P_Z = 32.787643894291335 # Orientation: H2_DX_X = -0.06329677731665839 H2_DX_Y = -0.6009070248813373 H2_DX_Z = 0.7968088010492735 H2_DY_X = -0.22089110251279465 H2_DY_Y = 0.7870430289610795 H2_DY_Z = 0.5759951313982086 H2_DZ_X = -0.9732423330353015 H2_DZ_Y = -0.13954933898807553 H2_DZ_Z = -0.18255230257649657 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 7 H3_INID2 = 3 H3_OUTID2 = 5 H3_INID2_ORIG = 306 H3_OUTID2_ORIG = 353 H3_INSEQ_CHAR = D H3_OUTSEQ_CHAR = D # Position: H3_P_X = 82.73257175842859 H3_P_Y = 122.78319636519831 H3_P_Z = 44.05948881222582 # Orientation: H3_DX_X = 0.4272087917199201 H3_DX_Y = 0.08527782247806215 H3_DX_Z = -0.9001224034933273 H3_DY_X = 0.22262409314878084 H3_DY_Y = 0.9549711360677975 H3_DY_Z = 0.1961342459313684 H3_DZ_X = 0.8763168156705063 H3_DZ_Y = -0.284179208019836 H3_DZ_Z = 0.38898716727204175 ############# END of Description of junction: j2