#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS1HS2HS8HS3
FINGERPRINT = 30:80:84:89:108:132
LOOP_LENGTH_SUM = 14
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  633
S1_NAME_ID3 = 641
S1_NUM_ID5_ORIG =  633
S1_NUM_ID3_ORIG = 641
S1_NAME2_ID5 =  635
S1_NAME2_ID3 = 639
S1_NUM2_ID5_ORIG =  635
S1_NUM2_ID3_ORIG = 639
S1_SQ2 = CGGAG
S1_SQLEN2 = 5
S1_SQ = GGCGGAGCG
S1_SQLEN = 9
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  609
S2_NAME_ID3 = 615
S2_NUM_ID5_ORIG =  609
S2_NUM_ID3_ORIG = 615
S2_NAME2_ID5 =  611
S2_NAME2_ID3 = 613
S2_NUM2_ID5_ORIG =  611
S2_NUM2_ID3_ORIG = 613
S2_SQ2 = CGA
S2_SQLEN2 = 3
S2_SQ = UGCGAGC
S2_SQLEN = 7
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  644
S3_NAME_ID3 = 651
S3_NUM_ID5_ORIG =  644
S3_NUM_ID3_ORIG = 651
S3_NAME2_ID5 =  646
S3_NAME2_ID3 = 649
S3_NUM2_ID5_ORIG =  646
S3_NUM2_ID3_ORIG = 649
S3_SQ2 = CGAG
S3_SQLEN2 = 4
S3_SQ = AGCGAGUC
S3_SQLEN = 8
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  658
S4_NAME_ID3 = 671
S4_NUM_ID5_ORIG =  658
S4_NUM_ID3_ORIG = 671
S4_NAME2_ID5 =  660
S4_NAME2_ID3 = 669
S4_NUM2_ID5_ORIG =  660
S4_NUM2_ID3_ORIG = 669
S4_SQ2 = GCGGCAUUAG
S4_SQLEN2 = 10
S4_SQ = GGGCGGCAUUAGUA
S4_SQLEN = 14
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 635
H1_OUTID2_ORIG = 613
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 4.630803587679168
H1_P_Y = 152.31801592106302
H1_P_Z = 56.438347594378826
# Orientation:
H1_DX_X = 0.19940701603210886
H1_DX_Y = -0.8755803810422265
H1_DX_Z = 0.43999527075993683
H1_DY_X = 0.37930475357048454
H1_DY_Y = 0.48297869056727905
H1_DY_Z = 0.7892144755240906
H1_DZ_X = -0.9035290509308478
H1_DZ_Y = 0.009517394174167748
H1_DZ_Z = 0.4284211401554927
## Properties of helix 2
H2_INID = 1
H2_OUTID = 9
H2_INID2 = 3
H2_OUTID2 = 7
H2_INID2_ORIG = 646
H2_OUTID2_ORIG = 639
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 33.273622510926764
H2_P_Y = 154.31552404546224
H2_P_Z = 53.976212456111
# Orientation:
H2_DX_X = 0.6137167405186972
H2_DX_Y = -0.36820638344437384
H2_DX_Z = -0.6984094942066008
H2_DY_X = 0.40884160936186476
H2_DY_Y = 0.9049652559463937
H2_DY_Z = -0.11784067202914628
H2_DZ_X = 0.6754260143505846
H2_DZ_Y = -0.21321806846677305
H2_DZ_Z = 0.7059304175467886
## Properties of helix 3
H3_INID = 1
H3_OUTID = 8
H3_INID2 = 3
H3_OUTID2 = 6
H3_INID2_ORIG = 660
H3_OUTID2_ORIG = 649
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 42.07406046477942
H3_P_Y = 147.466324437801
H3_P_Z = 36.518287324327595
# Orientation:
H3_DX_X = -0.23684243139001637
H3_DX_Y = 0.48021944750624357
H3_DX_Z = 0.8445679042741787
H3_DY_X = 0.7317138301527919
H3_DY_Y = -0.483708369010003
H3_DY_Z = 0.48023024114772994
H3_DZ_X = 0.6391404645744103
H3_DZ_Y = 0.7317209140010164
H3_DZ_Z = -0.23682054504861583
## Properties of helix 4
H4_INID = 1
H4_OUTID = 14
H4_INID2 = 3
H4_OUTID2 = 12
H4_INID2_ORIG = 611
H4_OUTID2_ORIG = 669
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 12.163990801164754
H4_P_Y = 134.0238784154782
H4_P_Z = 60.757117652724126
# Orientation:
H4_DX_X = -0.420648173033527
H4_DX_Y = 0.9072174200664733
H4_DX_Z = 0.003415735865765157
H4_DY_X = -0.8144844284962787
H4_DY_Y = -0.37930376536343147
H4_DY_Z = 0.4390259323983017
H4_DZ_X = 0.39958757520804333
H4_DZ_Y = 0.1818933927031594
H4_DZ_Z = 0.898467897829569
#############  END of Description of junction: j9