############# Start of Description of junction: j55 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS1HS6HS2 FINGERPRINT = 23:47:62:147:150:155 LOOP_LENGTH_SUM = 9 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1945 S1_NAME_ID3 = 1948 S1_NUM_ID5_ORIG = 1945 S1_NUM_ID3_ORIG = 1948 S1_NAME2_ID5 = 1946 S1_NAME2_ID3 = 1947 S1_NUM2_ID5_ORIG = 1946 S1_NUM2_ID3_ORIG = 1947 S1_SQ2 = CG S1_SQLEN2 = 2 S1_SQ = GCGG S1_SQLEN = 4 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1888 S2_NAME_ID3 = 1892 S2_NUM_ID5_ORIG = 1888 S2_NUM_ID3_ORIG = 1892 S2_NAME2_ID5 = 1889 S2_NAME2_ID3 = 1891 S2_NUM2_ID5_ORIG = 1889 S2_NUM2_ID3_ORIG = 1891 S2_SQ2 = CUG S2_SQLEN2 = 3 S2_SQ = CCUGC S2_SQLEN = 5 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1964 S3_NAME_ID3 = 1973 S3_NUM_ID5_ORIG = 1964 S3_NUM_ID3_ORIG = 1973 S3_NAME2_ID5 = 1965 S3_NAME2_ID3 = 1972 S3_NUM2_ID5_ORIG = 1965 S3_NUM2_ID3_ORIG = 1972 S3_SQ2 = CUUAAGGU S3_SQLEN2 = 8 S3_SQ = UCUUAAGGUA S3_SQLEN = 10 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2009 S4_NAME_ID3 = 2014 S4_NUM_ID5_ORIG = 2009 S4_NUM_ID3_ORIG = 2014 S4_NAME2_ID5 = 2010 S4_NAME2_ID3 = 2013 S4_NUM2_ID5_ORIG = 2010 S4_NUM2_ID3_ORIG = 2013 S4_SQ2 = AAUG S4_SQLEN2 = 4 S4_SQ = GAAUGG S4_SQLEN = 6 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 1946 H1_OUTID2_ORIG = 1891 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 114.98936841601156 H1_P_Y = 113.35014423067844 H1_P_Z = 88.743401679238 # Orientation: H1_DX_X = 0.7188910365342736 H1_DX_Y = -0.5196770465235119 H1_DX_Z = 0.4616616129886495 H1_DY_X = -0.5620162129671229 H1_DY_Y = -0.8253664399149727 H1_DY_Z = -0.05392602548100456 H1_DZ_X = 0.4090641196105622 H1_DZ_Y = -0.22069437504995904 H1_DZ_Z = -0.8854154611641576 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1965 H2_OUTID2_ORIG = 1947 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 117.21808014942248 H2_P_Y = 98.88738764190373 H2_P_Z = 103.65870813734917 # Orientation: H2_DX_X = -0.9855476226651945 H2_DX_Y = -0.15507058197027845 H2_DX_Z = 0.0681835615556281 H2_DY_X = 0.15770253286312652 H2_DY_Y = -0.986864500405332 H2_DY_Z = 0.035048095073790364 H2_DZ_X = 0.06185300791040049 H2_DZ_Y = 0.045294287135874356 H2_DZ_Z = 0.9970569858163998 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 10 H3_INID2 = 2 H3_OUTID2 = 9 H3_INID2_ORIG = 2010 H3_OUTID2_ORIG = 1972 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 113.24877252431314 H3_P_Y = 112.14213232308796 H3_P_Z = 105.04539885123529 # Orientation: H3_DX_X = 0.8736457263689204 H3_DX_Y = 0.45287212808415234 H3_DX_Z = -0.17790441366597065 H3_DY_X = -0.4855123265873402 H3_DY_Y = 0.7873869640259414 H3_DY_Z = -0.3798678054452296 H3_DZ_X = -0.03195192527938673 H3_DZ_Y = 0.4182446706014957 H3_DZ_Z = 0.9077722566725583 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1889 H4_OUTID2_ORIG = 2013 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 114.15321348927804 H4_P_Y = 129.04601801191876 H4_P_Z = 93.01209573825902 # Orientation: H4_DX_X = -0.2823460817939747 H4_DX_Y = -0.8403112109691335 H4_DX_Z = 0.46277182154402396 H4_DY_X = 0.652473550989555 H4_DY_Y = 0.18542039371226338 H4_DY_Z = 0.7347772062704934 H4_DZ_X = -0.7032488573433113 H4_DZ_Y = 0.509407838882737 H4_DZ_Z = 0.4959281181080115 ############# END of Description of junction: j55