############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS5 FINGERPRINT = 171 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 811 S1_NAME_ID3 = 821 S1_NUM_ID5_ORIG = 811 S1_NUM_ID3_ORIG = 821 S1_NAME2_ID5 = 813 S1_NAME2_ID3 = 819 S1_NUM2_ID5_ORIG = 813 S1_NUM2_ID3_ORIG = 819 S1_SQ2 = AGAUAGC S1_SQLEN2 = 7 S1_SQ = GGAGAUAGCUA S1_SQLEN = 11 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 685 S2_NAME_ID3 = 692 S2_NUM_ID5_ORIG = 685 S2_NUM_ID3_ORIG = 692 S2_NAME2_ID5 = 687 S2_NAME2_ID3 = 690 S2_NUM2_ID5_ORIG = 687 S2_NUM2_ID3_ORIG = 690 S2_SQ2 = GAAA S2_SQLEN2 = 4 S2_SQ = UCGAAACC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 813 H1_OUTID2_ORIG = 690 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 32.45747342730261 H1_P_Y = 149.03032083587567 H1_P_Z = 108.42306253226724 # Orientation: H1_DX_X = 0.29160250093298856 H1_DX_Y = 0.43444943100567457 H1_DX_Z = -0.8521864076295032 H1_DY_X = -0.9100328664187529 H1_DY_Y = 0.4004189467784727 H1_DY_Z = -0.10726065960308517 H1_DZ_X = 0.2946322512680766 H1_DZ_Y = 0.8067951158501501 H1_DZ_Z = 0.5121264273136461 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 11 H2_INID2 = 3 H2_OUTID2 = 9 H2_INID2_ORIG = 687 H2_OUTID2_ORIG = 819 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 31.262865441117473 H2_P_Y = 127.04552688353874 H2_P_Z = 89.54672256925663 # Orientation: H2_DX_X = 0.16218709450802038 H2_DX_Y = -0.45650578358443283 H2_DX_Z = 0.8748130176952174 H2_DY_X = -0.9686310655587533 H2_DY_Y = 0.09550484982385399 H2_DY_Z = 0.22941813898344776 H2_DZ_X = -0.18827959318404908 H2_DZ_Y = -0.8845797268839419 H2_DZ_Z = -0.42669602948278396 ############# END of Description of junction: j13