#############  Start of Description of junction: j41
# Number of strands:
NUM_STRANDS = 3
LILLEY = 2HS2HS2
FINGERPRINT = 72:103:156
LOOP_LENGTH_SUM = 4
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2239
S1_NAME_ID3 = 2246
S1_NUM_ID5_ORIG =  2239
S1_NUM_ID3_ORIG = 2246
S1_NAME2_ID5 =  2241
S1_NAME2_ID3 = 2244
S1_NUM2_ID5_ORIG =  2241
S1_NUM2_ID3_ORIG = 2244
S1_SQ2 = CUCA
S1_SQLEN2 = 4
S1_SQ = CUCUCACU
S1_SQLEN = 8
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  2131
S2_NAME_ID3 = 2136
S2_NUM_ID5_ORIG =  2131
S2_NUM_ID3_ORIG = 2136
S2_NAME2_ID5 =  2133
S2_NAME2_ID3 = 2134
S2_NUM2_ID5_ORIG =  2133
S2_NUM2_ID3_ORIG = 2134
S2_SQ2 = UG
S2_SQLEN2 = 2
S2_SQ = GCUGAG
S2_SQLEN = 6
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  2255
S3_NAME_ID3 = 2262
S3_NUM_ID5_ORIG =  2255
S3_NUM_ID3_ORIG = 2262
S3_NAME2_ID5 =  2257
S3_NAME2_ID3 = 2260
S3_NUM2_ID5_ORIG =  2257
S3_NUM2_ID3_ORIG = 2260
S3_SQ2 = GACA
S3_SQLEN2 = 4
S3_SQ = AGGACACC
S3_SQLEN = 8
S3_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 3
H1_OUTID2 = 4
H1_INID2_ORIG = 2241
H1_OUTID2_ORIG = 2134
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 122.70244288433027
H1_P_Y = 100.00532058936322
H1_P_Z = 36.3765345282739
# Orientation:
H1_DX_X = 0.5231202967953408
H1_DX_Y = 0.2843219494785103
H1_DX_Z = -0.8034339948779206
H1_DY_X = 0.8494459730216164
H1_DY_Y = -0.09741327149144752
H1_DY_Z = 0.5186060098520855
H1_DZ_X = 0.0691859378639208
H1_DZ_Y = -0.9537671013313798
H1_DZ_Z = -0.2924749945205889
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 3
H2_OUTID2 = 6
H2_INID2_ORIG = 2257
H2_OUTID2_ORIG = 2244
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 120.63143622111035
H2_P_Y = 124.12063938429635
H2_P_Z = 34.53163827862065
# Orientation:
H2_DX_X = -0.7218129332098613
H2_DX_Y = -0.3566722241794338
H2_DX_Z = 0.5931028696186331
H2_DY_X = 0.5584851857415742
H2_DY_Y = 0.20595840859630243
H2_DY_Z = 0.8035393153017978
H2_DZ_X = -0.40875467796486475
H2_DZ_Y = 0.9112442364302638
H2_DZ_Z = 0.050532710341563813
## Properties of helix 3
H3_INID = 1
H3_OUTID = 8
H3_INID2 = 3
H3_OUTID2 = 6
H3_INID2_ORIG = 2133
H3_OUTID2_ORIG = 2260
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 110.153411721874
H3_P_Y = 105.21506598139024
H3_P_Z = 45.75133558702301
# Orientation:
H3_DX_X = -0.3933548271369318
H3_DX_Y = 0.8389757472931905
H3_DX_Z = -0.3760208443981412
H3_DY_X = -0.5621133286094135
H3_DY_Y = -0.543106305303354
H3_DY_Z = -0.6237500676868848
H3_DZ_X = -0.7275304706799091
H3_DZ_Y = -0.03398877158045366
H3_DZ_Z = 0.6852329367731187
#############  END of Description of junction: j41