#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 9:73:77:78:86:137
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 45.79758324224673
H1_P_Y = 127.02121313547829
H1_P_Z = 37.174803998755664
# Orientation:
H1_DX_X = -0.17837275029422273
H1_DX_Y = -0.9369452625303012
H1_DX_Z = 0.3005274313178603
H1_DY_X = -0.5757895197132115
H1_DY_Y = -0.14828051703074152
H1_DY_Z = -0.8040393754397286
H1_DZ_X = 0.7979032466038163
H1_DZ_Y = -0.31645926008118863
H1_DZ_Z = -0.513034059072055
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 63.71193186864742
H2_P_Y = 144.1452283517242
H2_P_Z = 56.18850067962853
# Orientation:
H2_DX_X = -0.6558091838867455
H2_DX_Y = 0.4144176793546137
H2_DX_Z = 0.6310089550617803
H2_DY_X = 0.24483347121944377
H2_DY_Y = -0.6739207636013873
H2_DY_Z = 0.6970562213749929
H2_DZ_X = 0.7141224584764458
H2_DZ_Y = 0.611627984501439
H2_DZ_Z = 0.34050010701065503
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 25.676996185405304
H3_P_Y = 171.54989674354493
H3_P_Z = 66.33674905659039
# Orientation:
H3_DX_X = -0.7276489542637989
H3_DX_Y = 0.6715165975411139
H3_DX_Z = -0.13997306378590224
H3_DY_X = -0.3413314166006707
H3_DY_Y = -0.1774623735513785
H3_DY_Z = 0.923038444494523
H3_DZ_X = 0.5949956835139041
H3_DZ_Y = 0.7194251630297117
H3_DZ_Z = 0.3583400220453967
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 27.883400187823707
H4_P_Y = 141.69212428928222
H4_P_Z = 69.36575117795792
# Orientation:
H4_DX_X = -0.756134285984956
H4_DX_Y = -0.6443050731103597
H4_DX_Z = -0.1145945649770681
H4_DY_X = 0.6026223947689608
H4_DY_Y = -0.7538075971273202
H4_DY_Z = 0.2619548736634556
H4_DZ_X = -0.25516110769656564
H4_DZ_Y = 0.1290158101838017
H4_DZ_Z = 0.9582524353434678
#############  END of Description of junction: j1