############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 30:39:40:42:60:63:63:76:92:103:103:105:118:124:132:132:135:142:143:156:165 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = A ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = A ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 57.83925945679558 H1_P_Y = 91.97018230163562 H1_P_Z = 81.24770435194984 # Orientation: H1_DX_X = 0.13003856003204106 H1_DX_Y = -0.9870995827933484 H1_DX_Z = 0.0934044247024417 H1_DY_X = 0.2678008218715533 H1_DY_Y = -0.055736644846646755 H1_DY_Z = -0.9618607727868778 H1_DZ_X = 0.9546584167699521 H1_DZ_Y = 0.15009277154626943 H1_DZ_Z = 0.25709816650424955 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 41.212556992727286 H2_P_Y = 84.3196289321391 H2_P_Z = 71.3271054966993 # Orientation: H2_DX_X = -0.4227176121767471 H2_DX_Y = 0.4310363469370486 H2_DX_Z = 0.7971935072331888 H2_DY_X = -0.35923746097043363 H2_DY_Y = 0.7278933521587732 H2_DY_Z = -0.584054547554075 H2_DZ_X = -0.8320205928888456 H2_DZ_Y = -0.5332719151635956 H2_DZ_Z = -0.15284893688425427 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 47.46298115269382 H3_P_Y = 90.09119497539336 H3_P_Z = 98.59399025555082 # Orientation: H3_DX_X = -0.21361653740509468 H3_DX_Y = 0.9205940546713407 H3_DX_Z = 0.3269167500310317 H3_DY_X = -0.7587470185890552 H3_DY_Y = -0.36713618039374296 H3_DY_Z = 0.5380650395891706 H3_DZ_X = 0.6153624433854148 H3_DZ_Y = -0.13310751875708604 H3_DZ_Z = 0.7769243539245423 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 33.238345451261424 H4_P_Y = 102.29920797799342 H4_P_Z = 104.37607731034726 # Orientation: H4_DX_X = -0.9786732663422839 H4_DX_Y = 0.19099299980280193 H4_DX_Z = 0.07563274273266529 H4_DY_X = -0.06000949171540526 H4_DY_Y = -0.6179335386606084 H4_DY_Z = 0.7839368614259996 H4_DZ_X = 0.19646246117515886 H4_DZ_Y = 0.7626793663294649 H4_DZ_Z = 0.6162164275027777 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 12.39441483892244 H5_P_Y = 97.71937292568465 H5_P_Z = 94.33329192893484 # Orientation: H5_DX_X = -0.1448693534226635 H5_DX_Y = 0.9346650570118555 H5_DX_Z = -0.3246753788631196 H5_DY_X = -0.9727921815068132 H5_DY_Y = -0.07458463241759716 H5_DY_Z = 0.21934562727882678 H5_DZ_X = 0.18079889943831695 H5_DZ_Y = 0.3476181292857774 H5_DZ_Z = 0.9200398872623623 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = A H6_OUTSEQ_CHAR = A # Position: H6_P_X = 10.562704077197338 H6_P_Y = 90.33050843469036 H6_P_Z = 73.3498141281683 # Orientation: H6_DX_X = 0.6977658041573029 H6_DX_Y = -0.6729888922499327 H6_DX_Z = 0.24537488350874526 H6_DY_X = -0.7135109912721518 H6_DY_Y = -0.6833135983357437 H6_DY_Z = 0.15486959567095937 H6_DZ_X = 0.06344247695778904 H6_DZ_Y = -0.2831403843284761 H6_DZ_Z = -0.9569778340587476 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = A H7_OUTSEQ_CHAR = A # Position: H7_P_X = 31.14474953332981 H7_P_Y = 100.12828191757652 H7_P_Z = 77.90672704857336 # Orientation: H7_DX_X = 0.959696969148137 H7_DX_Y = -0.22917554877970758 H7_DX_Z = -0.162666208074711 H7_DY_X = -0.2755904285958728 H7_DY_Y = -0.8808311392094481 H7_DY_Z = -0.3849498926682742 H7_DZ_X = -0.0550603584643774 H7_DZ_Y = 0.4142644952690091 H7_DZ_Z = -0.9084895623425098 ############# END of Description of junction: j13