#############  Start of Description of junction: j40
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS5HS11
FINGERPRINT = 152
LOOP_LENGTH_SUM = 16
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  1972
S1_NAME_ID3 = 1988
S1_NUM_ID5_ORIG =  1972
S1_NUM_ID3_ORIG = 1988
S1_NAME2_ID5 =  1974
S1_NAME2_ID3 = 1986
S1_NUM2_ID5_ORIG =  1974
S1_NUM2_ID3_ORIG = 1986
S1_SQ2 = GCGUAGUACCUUG
S1_SQLEN2 = 13
S1_SQ = UAGCGUAGUACCUUGCC
S1_SQLEN = 17
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  2000
S2_NAME_ID3 = 2010
S2_NUM_ID5_ORIG =  2000
S2_NUM_ID3_ORIG = 2010
S2_NAME2_ID5 =  2002
S2_NAME2_ID3 = 2008
S2_NUM2_ID5_ORIG =  2002
S2_NUM2_ID3_ORIG = 2008
S2_SQ2 = CUUGCAU
S2_SQLEN2 = 7
S2_SQ = GGCUUGCAUGA
S2_SQLEN = 11
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 11
H1_INID2 = 3
H1_OUTID2 = 9
H1_INID2_ORIG = 1974
H1_OUTID2_ORIG = 2008
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 113.70056315583844
H1_P_Y = 110.31756335885638
H1_P_Z = 99.73020966491852
# Orientation:
H1_DX_X = 0.011921887996621194
H1_DX_Y = 0.8923916511297278
H1_DX_Z = -0.4511042114418302
H1_DY_X = 0.9996736908915835
H1_DY_Y = -4.444196228519104E-4
H1_DY_Z = 0.02554044303445835
H1_DZ_X = 0.022591598566592097
H1_DZ_Y = -0.45126150233002704
H1_DZ_Z = -0.892105753926657
## Properties of helix 2
H2_INID = 1
H2_OUTID = 17
H2_INID2 = 3
H2_OUTID2 = 15
H2_INID2_ORIG = 2002
H2_OUTID2_ORIG = 1986
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 100.16447821286374
H2_P_Y = 126.57734661091784
H2_P_Z = 120.99778392619852
# Orientation:
H2_DX_X = 0.49380179752078845
H2_DX_Y = -0.48683196166010134
H2_DX_Z = 0.7205237163837239
H2_DY_X = 0.7510775952347899
H2_DY_Y = 0.6563564065804428
H2_DY_Z = -0.07126509297779648
H2_DZ_X = -0.43822623232934177
H2_DZ_Y = 0.576360051224043
H2_DZ_Z = 0.689758552430817
#############  END of Description of junction: j40