############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 153 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 13 S1_NAME_ID3 = 20 S1_NUM_ID5_ORIG = 13 S1_NUM_ID3_ORIG = 20 S1_NAME2_ID5 = 15 S1_NAME2_ID3 = 18 S1_NUM2_ID5_ORIG = 15 S1_NUM2_ID3_ORIG = 18 S1_SQ2 = GAAG S1_SQLEN2 = 4 S1_SQ = GUGAAGUC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 26 S2_NAME_ID3 = 32 S2_NUM_ID5_ORIG = 26 S2_NUM_ID3_ORIG = 32 S2_NAME2_ID5 = 28 S2_NAME2_ID3 = 30 S2_NUM2_ID5_ORIG = 28 S2_NUM2_ID3_ORIG = 30 S2_SQ2 = CAC S2_SQLEN2 = 3 S2_SQ = GUCACAC S2_SQLEN = 7 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 15 H1_OUTID2_ORIG = 30 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = B # Position: H1_P_X = 2.64203304620807 H1_P_Y = -1.7402427253714654 H1_P_Z = 11.830656166733753 # Orientation: H1_DX_X = -0.19730901308861348 H1_DX_Y = 0.2852843856556637 H1_DX_Z = -0.9379136275025903 H1_DY_X = -0.5603681135692877 H1_DY_Y = -0.8178379758334668 H1_DY_Z = -0.13087636371559164 H1_DZ_X = -0.8043983656427918 H1_DZ_Y = 0.4997538039732059 H1_DZ_Z = 0.3212310768987283 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 28 H2_OUTID2_ORIG = 18 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = A # Position: H2_P_X = 20.782150384864714 H2_P_Y = -11.68248799208958 H2_P_Z = 9.272264480881248 # Orientation: H2_DX_X = 0.27605285756173004 H2_DX_Y = 0.7727710179910652 H2_DX_Z = 0.5715065822762284 H2_DY_X = -0.334060097498849 H2_DY_Y = -0.48039882976518555 H2_DY_Z = 0.8109382316917255 H2_DZ_X = 0.9012206561608878 H2_DZ_Y = -0.4147793607609884 H2_DZ_Z = 0.1255364918883881 ############# END of Description of junction: j2