#############  Start of Description of junction: j41
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS5HS11
FINGERPRINT = 153
LOOP_LENGTH_SUM = 16
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  1972
S1_NAME_ID3 = 1988
S1_NUM_ID5_ORIG =  1972
S1_NUM_ID3_ORIG = 1988
S1_NAME2_ID5 =  1974
S1_NAME2_ID3 = 1986
S1_NUM2_ID5_ORIG =  1974
S1_NUM2_ID3_ORIG = 1986
S1_SQ2 = GCGUAGUACCUUG
S1_SQLEN2 = 13
S1_SQ = UAGCGUAGUACCUUGCC
S1_SQLEN = 17
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  2000
S2_NAME_ID3 = 2010
S2_NUM_ID5_ORIG =  2000
S2_NUM_ID3_ORIG = 2010
S2_NAME2_ID5 =  2002
S2_NAME2_ID3 = 2008
S2_NUM2_ID5_ORIG =  2002
S2_NUM2_ID3_ORIG = 2008
S2_SQ2 = CUUGCAU
S2_SQLEN2 = 7
S2_SQ = GGCUUGCAUGA
S2_SQLEN = 11
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 11
H1_INID2 = 3
H1_OUTID2 = 9
H1_INID2_ORIG = 1974
H1_OUTID2_ORIG = 2008
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 113.62233155537578
H1_P_Y = 110.04930099241253
H1_P_Z = 99.47584805953467
# Orientation:
H1_DX_X = 0.0031334933481446114
H1_DX_Y = 0.8835171249041167
H1_DX_Z = -0.4683883764789698
H1_DY_X = 0.9996342450481848
H1_DY_Y = 0.00981437794295914
H1_DY_Z = 0.02520028000915886
H1_DZ_X = 0.02686181949131594
H1_DZ_Y = -0.4682960260206812
H1_DZ_Z = -0.8831632208526656
## Properties of helix 2
H2_INID = 1
H2_OUTID = 17
H2_INID2 = 3
H2_OUTID2 = 15
H2_INID2_ORIG = 2002
H2_OUTID2_ORIG = 1986
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 100.28067728885418
H2_P_Y = 126.60662326151305
H2_P_Z = 120.38816427893984
# Orientation:
H2_DX_X = 0.4839036727014445
H2_DX_Y = -0.49851827983187036
H2_DX_Z = 0.7192473567692446
H2_DY_X = 0.7580706897713014
H2_DY_Y = 0.649415115119055
H2_DY_Z = -0.05990690748622285
H2_DZ_X = -0.437225416525294
H2_DZ_Y = 0.5742295124150019
H2_DZ_Z = 0.6921664555696907
#############  END of Description of junction: j41