#############  Start of Description of junction: j5
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS5HS6
FINGERPRINT = 49
LOOP_LENGTH_SUM = 11
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  546
S1_NAME_ID3 = 557
S1_NUM_ID5_ORIG =  546
S1_NUM_ID3_ORIG = 557
S1_NAME2_ID5 =  548
S1_NAME2_ID3 = 555
S1_NUM2_ID5_ORIG =  548
S1_NUM2_ID3_ORIG = 555
S1_SQ2 = UACAAGGU
S1_SQLEN2 = 8
S1_SQ = CAUACAAGGUCC
S1_SQLEN = 12
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  600
S2_NAME_ID3 = 610
S2_NUM_ID5_ORIG =  600
S2_NUM_ID3_ORIG = 610
S2_NAME2_ID5 =  602
S2_NAME2_ID3 = 608
S2_NUM2_ID5_ORIG =  602
S2_NUM2_ID3_ORIG = 608
S2_SQ2 = AAGCCGA
S2_SQLEN2 = 7
S2_SQ = GGAAGCCGAUG
S2_SQLEN = 11
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 11
H1_INID2 = 3
H1_OUTID2 = 9
H1_INID2_ORIG = 548
H1_OUTID2_ORIG = 608
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 10.375015329234962
H1_P_Y = 127.23922649810443
H1_P_Z = 94.62424267198637
# Orientation:
H1_DX_X = 0.5383506507221902
H1_DX_Y = 0.5526230146611084
H1_DX_Z = -0.6362282456271942
H1_DY_X = 0.002618225513682404
H1_DY_Y = 0.7538686151111023
H1_DY_Z = 0.6570199814660498
H1_DZ_X = 0.8427168692758897
H1_DZ_Y = -0.35537292358495165
H1_DZ_Z = 0.40439876782765793
## Properties of helix 2
H2_INID = 1
H2_OUTID = 12
H2_INID2 = 3
H2_OUTID2 = 10
H2_INID2_ORIG = 602
H2_OUTID2_ORIG = 555
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -10.366714710131362
H2_P_Y = 117.05418998803701
H2_P_Z = 92.24628247651172
# Orientation:
H2_DX_X = 0.7192006506389426
H2_DX_Y = 0.4737748476613888
H2_DX_Z = 0.5082202454093476
H2_DY_X = -0.6703077663309749
H2_DY_Y = 0.28061449213663536
H2_DY_Z = 0.6869810806705487
H2_DZ_X = 0.18286039078184047
H2_DZ_Y = -0.8347412176994311
H2_DZ_Z = 0.5193930852030917
#############  END of Description of junction: j5