#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 8:75:77:78:84:138
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 45.96416198608577
H1_P_Y = 127.8055691629258
H1_P_Z = 37.49307994690917
# Orientation:
H1_DX_X = -0.17456307592033937
H1_DX_Y = -0.9354093988018377
H1_DX_Z = 0.3074686799633497
H1_DY_X = -0.5799133024448508
H1_DY_Y = -0.15469111826881488
H1_DY_Z = -0.7998569994544411
H1_DZ_X = 0.7957564289232835
H1_DZ_Y = -0.31793067571709344
H1_DZ_Z = -0.5154529961745737
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 63.65800243427749
H2_P_Y = 144.70596474718232
H2_P_Z = 56.225329940430726
# Orientation:
H2_DX_X = -0.6357678461505145
H2_DX_Y = 0.4214774814305997
H2_DX_Z = 0.6466498112951555
H2_DY_X = 0.2552180187785922
H2_DY_Y = -0.6758549090789359
H2_DY_Z = 0.6914361176310138
H2_DZ_X = 0.728466202848054
H2_DZ_Y = 0.6046295349392494
H2_DZ_Z = 0.32211817208484916
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 25.663244244423097
H3_P_Y = 172.18906363103403
H3_P_Z = 66.49341035030913
# Orientation:
H3_DX_X = -0.7040664401890986
H3_DX_Y = 0.6943382015006989
H3_DX_Z = -0.1489459960395152
H3_DY_X = -0.3408720845448201
H3_DY_Y = -0.14644202329949962
H3_DY_Z = 0.9286339191468471
H3_DZ_X = 0.6229740522505942
H3_DZ_Y = 0.7045915098471482
H3_DZ_Z = 0.33978542416321034
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 28.254399653456538
H4_P_Y = 142.5085617115222
H4_P_Z = 69.4787088280349
# Orientation:
H4_DX_X = -0.7611010600961094
H4_DX_Y = -0.6390949080679036
H4_DX_Z = -0.11082813181808149
H4_DY_X = 0.5971929834445824
H4_DY_Y = -0.7571223291602109
H4_DY_Z = 0.2648137443781451
H4_DZ_X = -0.2531515689170334
H4_DZ_Y = 0.13536423888419336
H4_DZ_Z = 0.9579096021995781
#############  END of Description of junction: j1