############# Start of Description of junction: j40 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS2 FINGERPRINT = 72:103:157 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2239 S1_NAME_ID3 = 2246 S1_NUM_ID5_ORIG = 2239 S1_NUM_ID3_ORIG = 2246 S1_NAME2_ID5 = 2241 S1_NAME2_ID3 = 2244 S1_NUM2_ID5_ORIG = 2241 S1_NUM2_ID3_ORIG = 2244 S1_SQ2 = CUCA S1_SQLEN2 = 4 S1_SQ = CUCUCACU S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2131 S2_NAME_ID3 = 2136 S2_NUM_ID5_ORIG = 2131 S2_NUM_ID3_ORIG = 2136 S2_NAME2_ID5 = 2133 S2_NAME2_ID3 = 2134 S2_NUM2_ID5_ORIG = 2133 S2_NUM2_ID3_ORIG = 2134 S2_SQ2 = UG S2_SQLEN2 = 2 S2_SQ = GCUGAG S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2255 S3_NAME_ID3 = 2262 S3_NUM_ID5_ORIG = 2255 S3_NUM_ID3_ORIG = 2262 S3_NAME2_ID5 = 2257 S3_NAME2_ID3 = 2260 S3_NUM2_ID5_ORIG = 2257 S3_NUM2_ID3_ORIG = 2260 S3_SQ2 = GACA S3_SQLEN2 = 4 S3_SQ = AGGACACC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 2241 H1_OUTID2_ORIG = 2134 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 122.75472621366035 H1_P_Y = 100.06766854788323 H1_P_Z = 36.099453311215164 # Orientation: H1_DX_X = 0.5452268575060941 H1_DX_Y = 0.28988176905912155 H1_DX_Z = -0.7865724593584389 H1_DY_X = 0.8348412709440254 H1_DY_Y = -0.10275828957790623 H1_DY_Z = 0.5408149279112067 H1_DZ_X = 0.07594554748371252 H1_DZ_Y = -0.9515299752977739 H1_DZ_Z = -0.2980318438140799 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 2257 H2_OUTID2_ORIG = 2244 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 120.80952923044762 H2_P_Y = 124.45978599940254 H2_P_Z = 34.54962507233316 # Orientation: H2_DX_X = -0.734549405868151 H2_DX_Y = -0.3610760610471715 H2_DX_Z = 0.5745095721373161 H2_DY_X = 0.5499438791249958 H2_DY_Y = 0.1791810484884877 H2_DY_Z = 0.8157547926157207 H2_DZ_X = -0.3974907548002733 H2_DZ_Y = 0.9151602209456087 H2_DZ_Z = 0.06695423696140779 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 2133 H3_OUTID2_ORIG = 2260 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 110.48332194661468 H3_P_Y = 105.51938661294213 H3_P_Z = 45.5882337605491 # Orientation: H3_DX_X = -0.3896396920450371 H3_DX_Y = 0.8412616608592742 H3_DX_Z = -0.3747795730177259 H3_DY_X = -0.5540634570507876 H3_DY_Y = -0.5391844363349207 H3_DY_Z = -0.6342663708373095 H3_DZ_X = -0.7356592933851829 H3_DZ_Y = -0.03948368754934961 H3_DZ_Z = 0.6762000018289811 ############# END of Description of junction: j40