#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS1
FINGERPRINT = 166
LOOP_LENGTH_SUM = 2
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  4
S1_NAME_ID3 = 8
S1_NUM_ID5_ORIG =  4
S1_NUM_ID3_ORIG = 8
S1_NAME2_ID5 =  5
S1_NAME2_ID3 = 7
S1_NUM2_ID5_ORIG =  5
S1_NUM2_ID3_ORIG = 7
S1_SQ2 = AGA
S1_SQLEN2 = 3
S1_SQ = GAGAG
S1_SQLEN = 5
S1_CHAR = R
## Properties of strand 2
S2_NAME_ID5 =  7
S2_NAME_ID3 = 11
S2_NUM_ID5_ORIG =  7
S2_NUM_ID3_ORIG = 11
S2_NAME2_ID5 =  8
S2_NAME2_ID3 = 10
S2_NUM2_ID5_ORIG =  8
S2_NUM2_ID3_ORIG = 10
S2_SQ2 = TCT
S2_SQLEN2 = 3
S2_SQ = CTCTC
S2_SQLEN = 5
S2_CHAR = T
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 5
H1_OUTID2_ORIG = 10
H1_INSEQ_CHAR = R
H1_OUTSEQ_CHAR = T
# Position:
H1_P_X = 17.114012843457033
H1_P_Y = 16.5388242569924
H1_P_Z = 31.1765351209092
# Orientation:
H1_DX_X = -0.7496278138410162
H1_DX_Y = 0.6357032614004297
H1_DX_Z = 0.1842267737349914
H1_DY_X = 0.6181844318080927
H1_DY_Y = 0.5730533096318133
H1_DY_Z = 0.5380129297611056
H1_DZ_X = 0.23644481171310971
H1_DZ_Y = 0.517195579800223
H1_DZ_Z = -0.822558559161024
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 8
H2_OUTID2_ORIG = 7
H2_INSEQ_CHAR = T
H2_OUTSEQ_CHAR = R
# Position:
H2_P_X = 11.895929272295724
H2_P_Y = 7.743205124892809
H2_P_Z = 44.54191426379998
# Orientation:
H2_DX_X = -0.8505381849299916
H2_DX_Y = 0.4698243922456502
H2_DX_Z = -0.23632569988683372
H2_DY_X = -0.2998795115369841
H2_DY_Y = -0.8024109785449696
H2_DY_Z = -0.5159543585152164
H2_DZ_X = -0.43203827901742287
H2_DZ_Y = -0.36796964815254896
H2_DZ_Z = 0.8233718865143231
#############  END of Description of junction: j1