#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 9:74:77:79:86:137
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 45.85333302609874
H1_P_Y = 127.0993760973626
H1_P_Z = 37.16433020919982
# Orientation:
H1_DX_X = -0.17789972827465306
H1_DX_Y = -0.9372616802926359
H1_DX_Z = 0.299820328421589
H1_DY_X = -0.581139252706329
H1_DY_Y = -0.14581004753547688
H1_DY_Z = -0.800635122263337
H1_DZ_X = 0.7941214363330928
H1_DZ_Y = -0.31667013230287466
H1_DZ_Z = -0.518739984639268
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 63.68675639622945
H2_P_Y = 143.98352840171833
H2_P_Z = 55.850999874793594
# Orientation:
H2_DX_X = -0.6444296934085045
H2_DX_Y = 0.438016818836104
H2_DX_Z = 0.6267787780948879
H2_DY_X = 0.24983786563189625
H2_DY_Y = -0.6540833977642251
H2_DY_Z = 0.7139719529965518
H2_DZ_X = 0.7226973164125567
H2_DZ_Y = 0.61669779891443
H2_DZ_Z = 0.31207757635590383
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 25.664737406588088
H3_P_Y = 171.39969866453558
H3_P_Z = 66.26022365225555
# Orientation:
H3_DX_X = -0.7093443429712423
H3_DX_Y = 0.6883115993659317
H3_DX_Z = -0.15184777006257377
H3_DY_X = -0.3601654829656482
H3_DY_Y = -0.16876302416852695
H3_DY_Z = 0.9174965212760213
H3_DZ_X = 0.6058972090832064
H3_DZ_Y = 0.7055112925047808
H3_DZ_Z = 0.3676171761131428
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 27.630600562088894
H4_P_Y = 142.11653843426134
H4_P_Z = 68.9135212774766
# Orientation:
H4_DX_X = -0.745454336765075
H4_DX_Y = -0.6564274530246337
H4_DX_Z = -0.11576195710908621
H4_DY_X = 0.618591504719241
H4_DY_Y = -0.7459878059810876
H4_DY_Z = 0.2466713271069807
H4_DZ_X = -0.24827883938693773
H4_DZ_Y = 0.11227284731015175
H4_DZ_Z = 0.9621602910479936
#############  END of Description of junction: j1