############# Start of Description of junction: j80 # Number of strands: NUM_STRANDS = 5 LILLEY = HS7HS8HS8HS9HS11 FINGERPRINT = 21:22:32:48:101:122:132:149:153:165 LOOP_LENGTH_SUM = 43 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2424 S1_NAME_ID3 = 2435 S1_NUM_ID5_ORIG = 2424 S1_NUM_ID3_ORIG = 2435 S1_NAME2_ID5 = 2425 S1_NAME2_ID3 = 2434 S1_NUM2_ID5_ORIG = 2425 S1_NUM2_ID3_ORIG = 2434 S1_SQ2 = GGAUAACAGG S1_SQLEN2 = 10 S1_SQ = GGGAUAACAGGC S1_SQLEN = 12 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2036 S2_NAME_ID3 = 2048 S2_NUM_ID5_ORIG = 2036 S2_NUM_ID3_ORIG = 2048 S2_NAME2_ID5 = 2037 S2_NAME2_ID3 = 2047 S2_NUM2_ID5_ORIG = 2037 S2_NUM2_ID3_ORIG = 2047 S2_SQ2 = ACGAAAAGACC S2_SQLEN2 = 11 S2_SQ = GACGAAAAGACCC S2_SQLEN = 13 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 2474 S3_NAME_ID3 = 2488 S3_NUM_ID5_ORIG = 2474 S3_NUM_ID3_ORIG = 2488 S3_NAME2_ID5 = 2475 S3_NAME2_ID3 = 2487 S3_NUM2_ID5_ORIG = 2475 S3_NUM2_ID3_ORIG = 2487 S3_SQ2 = CACCUCGAUGUCG S3_SQLEN2 = 13 S3_SQ = GCACCUCGAUGUCGG S3_SQLEN = 15 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2558 S4_NAME_ID3 = 2568 S4_NUM_ID5_ORIG = 2558 S4_NUM_ID3_ORIG = 2568 S4_NAME2_ID5 = 2559 S4_NAME2_ID3 = 2567 S4_NUM2_ID5_ORIG = 2559 S4_NUM2_ID3_ORIG = 2567 S4_SQ2 = UGGGUUCAG S4_SQLEN2 = 9 S4_SQ = CUGGGUUCAGA S4_SQLEN = 11 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 2584 S5_NAME_ID3 = 2595 S5_NUM_ID5_ORIG = 2584 S5_NUM_ID3_ORIG = 2595 S5_NAME2_ID5 = 2585 S5_NAME2_ID3 = 2594 S5_NUM2_ID5_ORIG = 2585 S5_NUM2_ID3_ORIG = 2594 S5_SQ2 = CGGUCUCUAU S5_SQLEN2 = 10 S5_SQ = UCGGUCUCUAUC S5_SQLEN = 12 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 13 H1_INID2 = 2 H1_OUTID2 = 12 H1_INID2_ORIG = 2425 H1_OUTID2_ORIG = 2047 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 48.73886204235432 H1_P_Y = 133.21345998029992 H1_P_Z = 104.42193239954337 # Orientation: H1_DX_X = 0.7176574345181805 H1_DX_Y = -0.412300584442022 H1_DX_Z = -0.5612272576680084 H1_DY_X = -0.6584042665793035 H1_DY_Y = -0.1391596992926054 H1_DY_Z = -0.7396880422468541 H1_DZ_X = 0.2268735957112682 H1_DZ_Y = 0.900357043711864 H1_DZ_Z = -0.3713294566924077 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 12 H2_INID2 = 2 H2_OUTID2 = 11 H2_INID2_ORIG = 2475 H2_OUTID2_ORIG = 2434 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 64.07213317093607 H2_P_Y = 107.31494364050293 H2_P_Z = 103.4063539846964 # Orientation: H2_DX_X = -0.590050774120634 H2_DX_Y = -0.48639730987810026 H2_DX_Z = -0.6444049510230343 H2_DY_X = 0.4799038073779798 H2_DY_Y = 0.4305524607793245 H2_DY_Z = -0.7644062494387356 H2_DZ_X = 0.6492552807823557 H2_DZ_Y = -0.7602908887131434 H2_DZ_Z = -0.020623891873484013 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 15 H3_INID2 = 2 H3_OUTID2 = 14 H3_INID2_ORIG = 2559 H3_OUTID2_ORIG = 2487 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 57.03745650802885 H3_P_Y = 109.99719629116062 H3_P_Z = 125.07870485092869 # Orientation: H3_DX_X = 0.8722198862278674 H3_DX_Y = 0.2493641966616309 H3_DX_Z = 0.42077305937043263 H3_DY_X = -0.45145209471780845 H3_DY_Y = 0.07940724339621852 H3_DY_Z = 0.8887550257923209 H3_DZ_X = 0.18821125429569463 H3_DZ_Y = -0.9651486865346186 H3_DZ_Z = 0.1818365657312313 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 11 H4_INID2 = 2 H4_OUTID2 = 10 H4_INID2_ORIG = 2585 H4_OUTID2_ORIG = 2567 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 66.22181523143075 H4_P_Y = 137.89874211369454 H4_P_Z = 120.03722889140191 # Orientation: H4_DX_X = -0.3026491845609911 H4_DX_Y = 0.7167704872200886 H4_DX_Z = 0.6282066059306004 H4_DY_X = 0.8229816273346273 H4_DY_Y = -0.13592039911642928 H4_DY_Z = 0.5515676623712551 H4_DZ_X = 0.48073351469834336 H4_DZ_Y = 0.6839339980979844 H4_DZ_Z = -0.5487527440400299 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 12 H5_INID2 = 2 H5_OUTID2 = 11 H5_INID2_ORIG = 2037 H5_OUTID2_ORIG = 2594 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 40.20628724654237 H5_P_Y = 104.22112610335958 H5_P_Z = 126.24794462296887 # Orientation: H5_DX_X = -0.8202931611792295 H5_DX_Y = -0.2882405504049643 H5_DX_Z = -0.4940005210774814 H5_DY_X = 0.5717121008567858 H5_DY_Y = -0.3886777324502617 H5_DY_Z = -0.7225475029582782 H5_DZ_X = 0.016260487584787597 H5_DZ_Y = -0.8751268510333574 H5_DZ_Z = 0.4836202964557401 ############# END of Description of junction: j80