#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS4HS4
FINGERPRINT = 146
LOOP_LENGTH_SUM = 8
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  2
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  4
S1_NAME2_ID3 = 9
S1_NUM2_ID5_ORIG =  4
S1_NUM2_ID3_ORIG = 9
S1_SQ2 = CCGATA
S1_SQLEN2 = 6
S1_SQ = TACCGATAAG
S1_SQLEN = 10
S1_CHAR = T
## Properties of strand 2
S2_NAME_ID5 =  4
S2_NAME_ID3 = 13
S2_NUM_ID5_ORIG =  4
S2_NUM_ID3_ORIG = 13
S2_NAME2_ID5 =  6
S2_NAME2_ID3 = 11
S2_NUM2_ID5_ORIG =  6
S2_NUM2_ID3_ORIG = 11
S2_SQ2 = TATCGG
S2_SQLEN2 = 6
S2_SQ = CTTATCGGTA
S2_SQLEN = 10
S2_CHAR = N
## Properties of helix 1
H1_INID = 1
H1_OUTID = 10
H1_INID2 = 3
H1_OUTID2 = 8
H1_INID2_ORIG = 4
H1_OUTID2_ORIG = 11
H1_INSEQ_CHAR = T
H1_OUTSEQ_CHAR = N
# Position:
H1_P_X = 59.39711008700828
H1_P_Y = 10.689975358933381
H1_P_Z = 94.86308169857777
# Orientation:
H1_DX_X = 0.26832734595604535
H1_DX_Y = -0.5496698267033278
H1_DX_Z = -0.7911153626520786
H1_DY_X = 0.7222532088735392
H1_DY_Y = 0.6582192688198951
H1_DY_Z = -0.21236218219370073
H1_DZ_X = 0.6374564594417862
H1_DZ_Y = -0.5144030285351437
H1_DZ_Z = 0.5736190256170204
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 6
H2_OUTID2_ORIG = 9
H2_INSEQ_CHAR = N
H2_OUTSEQ_CHAR = T
# Position:
H2_P_X = 34.23103247288381
H2_P_Y = 9.11594819701825
H2_P_Z = 73.77191697885367
# Orientation:
H2_DX_X = 0.27990315093093443
H2_DX_Y = 0.9520686240894793
H2_DX_Z = 0.12336758538329207
H2_DY_X = 0.16652520484191768
H2_DY_Y = 0.07840706607937697
H2_DY_Z = -0.9829148936409382
H2_DZ_X = -0.945475320804988
H2_DZ_Y = 0.2956647882538501
H2_DZ_Z = -0.1365970377991914
#############  END of Description of junction: j1