#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 156
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  4
S1_NAME_ID3 = 10
S1_NUM_ID5_ORIG =  4
S1_NUM_ID3_ORIG = 10
S1_NAME2_ID5 =  6
S1_NAME2_ID3 = 8
S1_NUM2_ID5_ORIG =  6
S1_NUM2_ID3_ORIG = 8
S1_SQ2 = CAC
S1_SQLEN2 = 3
S1_SQ = GUCACAC
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  36
S2_NAME_ID3 = 43
S2_NUM_ID5_ORIG =  36
S2_NUM_ID3_ORIG = 43
S2_NAME2_ID5 =  38
S2_NAME2_ID3 = 41
S2_NUM2_ID5_ORIG =  38
S2_NUM2_ID3_ORIG = 41
S2_SQ2 = GAAG
S2_SQLEN2 = 4
S2_SQ = GUGAAGUC
S2_SQLEN = 8
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 6
H1_OUTID2_ORIG = 41
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 33.448277527985866
H1_P_Y = 13.51426954229914
H1_P_Z = 8.68050121409578
# Orientation:
H1_DX_X = -0.6854111431965251
H1_DX_Y = 0.6064353604221822
H1_DX_Z = 0.4030480348688652
H1_DY_X = 0.2779926812790663
H1_DY_Y = -0.2936608114215229
H1_DY_Z = 0.9145946626733217
H1_DZ_X = 0.6730019568599417
H1_DZ_Y = 0.7389177772018147
H1_DZ_Z = 0.03269380060224236
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 38
H2_OUTID2_ORIG = 8
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 17.185544216423835
H2_P_Y = -0.6343494617975116
H2_P_Z = 11.989712929022797
# Orientation:
H2_DX_X = -0.22403553472402393
H2_DX_Y = -0.1503942655087107
H2_DX_Z = -0.9629068719679044
H2_DY_X = 0.5162100655826158
H2_DY_Y = -0.8563532654987407
H2_DY_Z = 0.013647448876428214
H2_DZ_X = -0.8266409422307319
H2_DZ_Y = -0.494004706021856
H2_DZ_Z = 0.26948859541017534
#############  END of Description of junction: j1