#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS2HS3
FINGERPRINT = 179
LOOP_LENGTH_SUM = 5
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  4
S1_NAME_ID3 = 12
S1_NUM_ID5_ORIG =  4
S1_NUM_ID3_ORIG = 12
S1_NAME2_ID5 =  6
S1_NAME2_ID3 = 10
S1_NUM2_ID5_ORIG =  6
S1_NUM2_ID3_ORIG = 10
S1_SQ2 = UGAAG
S1_SQLEN2 = 5
S1_SQ = GCUGAAGCG
S1_SQLEN = 9
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  13
S2_NAME_ID3 = 20
S2_NUM_ID5_ORIG =  13
S2_NUM_ID3_ORIG = 20
S2_NAME2_ID5 =  15
S2_NAME2_ID3 = 18
S2_NUM2_ID5_ORIG =  15
S2_NUM2_ID3_ORIG = 18
S2_SQ2 = CACG
S2_SQLEN2 = 4
S2_SQ = CGCACGGC
S2_SQLEN = 8
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 6
H1_OUTID2_ORIG = 18
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = -11.181335107550243
H1_P_Y = 54.848960725653086
H1_P_Z = -79.98180618989382
# Orientation:
H1_DX_X = 0.8219447471596695
H1_DX_Y = 0.5695334632926006
H1_DX_Z = -0.006202161443411569
H1_DY_X = 0.569562108794301
H1_DY_Y = -0.8218424310011017
H1_DY_Z = 0.013191771374280847
H1_DZ_X = 0.002415955799635938
H1_DZ_Y = -0.014375423337611437
H1_DZ_Z = -0.9998937495361417
## Properties of helix 2
H2_INID = 1
H2_OUTID = 9
H2_INID2 = 3
H2_OUTID2 = 7
H2_INID2_ORIG = 15
H2_OUTID2_ORIG = 10
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -11.1915629568887
H2_P_Y = 55.580903580316544
H2_P_Z = -56.59750616894202
# Orientation:
H2_DX_X = -0.9870491199409095
H2_DX_Y = 0.16008531230033896
H2_DX_Z = -0.010330905554795322
H2_DY_X = -0.1602705838037295
H2_DY_Y = -0.9868562504228535
H2_DY_Z = 0.020690117654524443
H2_DZ_X = -0.006882934773022598
H2_DZ_Y = 0.02207790268685983
H2_DZ_Z = 0.9997325599488391
#############  END of Description of junction: j1