RNAJunction Database - Junction Profile:2644
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2644: 1KIS_j4_A-C5_A-G9_B-U21_B-G27

Primary Citation: (from PDB entry 1KIS)

K.Y.CHANG I.TINOCO JUNIOR THE STRUCTURE OF AN RNA "KISSING" HAIRPIN COMPLEX OF THE HIV TAR HAIRPIN LOOP AND ITS COMPLEMENT J.MOL.BIOL. V. 269 52 1997

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1KIS j4 A-C5 A-G9 B-U21 B-G27 
NC-IUBMB Classification:Cluster Page
Angles: 32:36:135:142:159:168°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.38108Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CCCU 4nt

Strand 2: Chain A: GGGAGG 6nt

Strand 3: Chain B: AGAC 4nt

Strand 4: Chain B: GUUCC 5nt

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